Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015806601.1_cds_XP_016494427.1_8835
CDS Infomation

[gene=LOC107813657] [db_xref=GeneID:107813657] [protein=PHD finger protein At1g33420-like] [protein_id=XP_016494427.1] [location=20237..22375] [gbkey=CDS]
Sequence

ATGGTGGTAATGAATGGAAGGCCTATGAAGCGGTTGAAGAGGAGAGTCACGGCGGACCTC
AACGACTTTCTCACGTTCCCCGACGTCGGCAGTATCGGCGGTGGTAGTAGCGAACCGTTC
AGGACGACGGTAAAGGCTTTTTTGTCGAAGCACGCGCTCTTACCGCCGCCTTCGTCGCTG
TTTCCTCACCTGCTGACGTGGCAGATCCTCTTCCGCGTCGGCGACCTCACCAACGACGAC
GGCGACGAGGACTCTTCTCCGGCAATCGTCTGCCTCGATGTAATCGAAGAAGACGTCGCC
AGATCTAGATCCGTTTATTGCGACCAATGCCGAGTCGTTGGTTGGAGCAGTAATCCAGTT
TGTGCAAAGCGTTTCCACTTTATTATCAAGTCAGACGGAAATTCAATCGGCGGTTATAAC
AAGCCTTGTGCCGGCTGTGGTGAAGCTCTTCACTTATCTGAGTCTAGGTGCAAATCGTGC
AATCATGTTATGACTACAGAAGATGTTGAAGATTGGATGTACCATCAGTTGGAAGATAAC
AGTCATCTTCTGCATGCTGTGATCCATTCCAATGGCTATGGGCATCTTCTCAGGGTAAAT
GGCAGAGAAGGTGGCTCCAGGTTGCTTTCTGGGAACAATATAATGAATTTCTGGGATCGA
CTTTGTAAAGTTATTGGAGCTAGAAAAATCAGTGTAATGGATGTTTCAAAGAAGTATGGT
TTGGAATTACGTCTGCTACATTGCCTTACAAAAGGTCATCCCTGGTATGGTGAATGGGGT
TATCAGTTTGGAGCTGGTAGCTTTGGTTTGACTCAAAATGCTTATAAACAAGCTGTAGAG
AACCTTTCTTCTCTGCCCTTGACCATATTTTTATCTCAAGGAAGGAAACCTCGAACCCGT
TTGCAGGATTTGATTTCGTTTTATCAATCCTTGTCGGAAGGTGAACTTGTAAATATTAGA
GACCTGTTTGTTTTCTTGACTAGTTCAATTCGTGATGCCCGCAAATCTGCATTGGGGGCT
GATGACAATTCCACTTATAAGAAGCGCAAACTTTGCGACTCCAAGTCCAAGGTCTTATGT
GCTTGGACCAGTAATGATGTTTTACGTGTTGAAGAAGCAATGTTTAGAGTACTACGAGCT
GTCTCTGGGTCTAATTGGGTCAGCTGGCGTGCTCTTAGAGGTGCGGTCTGTAAAGCTGGA
CCTCCGGAACTACTTGATTATTGCTTAAAGGAACTCAATGGGAAACAGGCAGCCGATGGG
ATGGTTGTCAATGCCCGCTGTGTTAATGGATCCGGCGCTATGGAGTATAAACTTGAGCGT
GGCAACCCAATGGTTAATGTGAATACAAATGGGAACAGATTGCCTTGCACTCCAAACTTC
CCATCTGAGGAACATCTGCGTCGAGATTTGAAGTACTTGTATGAGTGCATGCTAAACCCG
CAGACAATGTTAAATCATATTCCTTTAACCAAAAGGGAACTTGCAGTTCGCTCCGCTAGA
ATTGTTCTTGATTGCAAGCAATTTATGAAAGAATATCAACCCGAGAGATTCTTGCCTATC
CCAAAATCAGATTCTATCCAGCTGTTATGTGAGGTGGATATCATGGAACATTCTGATGTG
CATTCCAGAAATCCTCCTCCAGAATTAATGATTCTGCCCTCGGATGCTACGATTTCTGAC
TTGAAAGCGGAGGCAACGAGGACATTTCAAGATGTATACTTGATGTTTAGAAGATTCCAA
GCTGATGAGTTAGTTGGGTACAGCGGGCTGAAAGAAGCTACTCAGGTCAAACTCCTTTTA
GGATCTGCTGAGTTTGTCACAGTCCGAGGAAAGTTCCTTGGGAAAAATGCACTGAGCAGG
TATAGAATGGAAAGGGGAGTTGAGAGATGGACAGTAGATTGCTTCTGTGGAGCAAAGGAT
GATGATGGGGAGAGGATGTTGGCTTGTGATGTCTGCGGTGTTTGGCAGCATACCAGATGT
GCGGGCATACCCGACCTGGATGCTGTTCCTGCGAGGTTCATTTGCCTCAGGTGCAGGTGT
GTTAGTCAGACTACAAATACAAGCGGGAATTGCAAGGATGAATCAGTTGCTGGGGGCGCT
CGCGGGGGTTTAGGAAAGAGCTTGACTAATGCTGCCTGA

Peptide Sequence

PEP ID

XP_016494427.1
PEP Infomation

PREDICTED: PHD finger protein At1g33420-like [Nicotiana tabacum]
Sequence

MVVMNGRPMKRLKRRVTADLNDFLTFPDVGSIGGGSSEPFRTTVKAFLSKHALLPPPSSL
FPHLLTWQILFRVGDLTNDDGDEDSSPAIVCLDVIEEDVARSRSVYCDQCRVVGWSSNPV
CAKRFHFIIKSDGNSIGGYNKPCAGCGEALHLSESRCKSCNHVMTTEDVEDWMYHQLEDN
SHLLHAVIHSNGYGHLLRVNGREGGSRLLSGNNIMNFWDRLCKVIGARKISVMDVSKKYG
LELRLLHCLTKGHPWYGEWGYQFGAGSFGLTQNAYKQAVENLSSLPLTIFLSQGRKPRTR
LQDLISFYQSLSEGELVNIRDLFVFLTSSIRDARKSALGADDNSTYKKRKLCDSKSKVLC
AWTSNDVLRVEEAMFRVLRAVSGSNWVSWRALRGAVCKAGPPELLDYCLKELNGKQAADG
MVVNARCVNGSGAMEYKLERGNPMVNVNTNGNRLPCTPNFPSEEHLRRDLKYLYECMLNP
QTMLNHIPLTKRELAVRSARIVLDCKQFMKEYQPERFLPIPKSDSIQLLCEVDIMEHSDV
HSRNPPPELMILPSDATISDLKAEATRTFQDVYLMFRRFQADELVGYSGLKEATQVKLLL
GSAEFVTVRGKFLGKNALSRYRMERGVERWTVDCFCGAKDDDGERMLACDVCGVWQHTRC
AGIPDLDAVPARFICLRCRCVSQTTNTSGNCKDESVAGGARGGLGKSLTNAA

Transcript Sequence

Gene sequence data has not been registered.